|
Bangladesh Agricultural University | |
| Department of Medicine |
Dr. Muhammad Jasim Uddin
Associate Professor
Department of Medicine
Faculty of Veterinary Science
Research Interest:
Genomics
-Genetics and genomics behind the production traits and diseases of livestock for sustainable animal production and welfare.
Veterinary Immunology
-Host-pathogen interactions using next generation genomics and epigenetics tools.
-Identification of candidate genes and genetic markers controlling the immune competence and production traits in livestock.
Epigenetics
-Epigenetics of immune response and muscle growth in porcine model.
Diagnosis
-Diagnosis of emerging animal diseases and development of diagnostic assays.
Total Publications: 131
| Journal Article (131) |
| 2019 |
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1.
Novel variant in the leptin receptor (LEPR) gene and its association with fat quality, odour and flavour in sheep Journal of the Indonesian Tropical Animal Agriculture Author List: A Gunawan, FW Pramukti, K Listyarini, MA Abuzahra, J Jakaria, C Sumantri, I Inounu, MJ Uddin Vol. 44, pp 9-Jan. 2019. |
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2.
RNA deep sequencing reveals novel transcripts and pathways involved in the unsaturated fatty acid metabolism in chicken Gene Reports Author List: Gunawan A, Jakaria, Listyarini K, Furqon A, Sumantri C, Akter SH, Uddin MJ Vol. 15, pp 100370. 2019. |
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3.
Effects of vitamin and mineral premix withdrawal from diets on carcass and meat quality of feedlot steers Tropical Animal Health and Production Author List: Konca Y, Beyzi SB, Köknur O, Köknur S, Yalçın H, Çapar TD, Uddin MJ, Cinar MU Vol. , pp . 2019. |
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4.
Heterogeneous expression of Toll-like receptors 1-10 genes in lymphoid tissues in different ages of pigs Gene Reports Author List: Uddin MJ, Cinar MU, Kaewmala K, Tesfaye D, Tholen E, Looft C, Schellander K Vol. , pp . 2019. |
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5.
PBMCs transcriptome profiles identified breed-specific transcriptome signatures for PRRSV vaccination in German Landrace and Pietrain pigs PloS One Author List: Islam MA, Neuhoff C, Rony SR, Große-Brinkhaus C, Uddin MJ, Hoelker M, Tesfaye D, Tholen E, Schellander K, Pröll-Cornelissen M Vol. , pp . 2019. |
| 2018 |
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6.
Transcriptome profile of lung dendritic cells after in vitro porcine reproductive and respiratory syndrome virus (PRRSV) infection PloS One Author List: Pröll MJ, Neuhoff C, Schellander K, Uddin MJ, Cinar MU, Sahadevan S, Qu X, Islam MA, Poirier M, Müller MA, Drosten C, Tesfaye D, Tholen E, Große-Brinkhaus C Vol. 12, pp . 2018. |
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7.
Association and Expression of CYP2A6 and KIF12 Genes related to Sheepmeat Flavour and Odour Tropical Animal Science Journal Author List: Listyarini K, Gunawan A, Jakaria, Furqon A, Sumantri C, Uddin MJ Vol. 41, pp 100-107. 2018. |
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8.
Transcriptome Signature of Liver Tissue with Divergent Mutton Odour and Flavour using RNA Deep Sequencing Gene Author List: Gunawan A, Jakaria, Listyarini K, Furqon A, Sumantri C, Akter SH, Uddin MJ Vol. 676, pp 86-94. 2018. |
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9.
Association study and expression analysis of SCD as a candidate gene for fatty acid composition in Indonesian crossbred chickens International Journal of Poultry Science Author List: Gunawan A, Nurajizah ES, Listyarini K, Furqon A, Bilyaro W, Sumantri C, Jakaria, Akter SH, and Uddin MJ Vol. 17, pp 348-355. 2018. |
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10.
Variant discovery in the sheepmeat odour and flavour in Javanese fat tailed sheep using RNA sequencing IC-FSSAT 2017 Author List: Abuzahra M AM, Jakaria, Listyarini K, Furqon A, Sumantri C, Uddin MJ, Gunawan A Vol. 157, pp 12030. 2018. |
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11.
Expression of CYP2A6, KIF12, and SULT1C1 in liver of sheep with divergent sheepmeat flavour and odour IC-FSSAT 2017 Author List: Listyarini K, Jakaria, Furqon A, Sumantri C, Uddin MJ, Gunawan A Vol. 157, pp 12029. 2018. |
| 2017 |
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12.
PBMC transcriptome profiles identify potential candidate genes and functional networks controlling the innate and the adaptive immune response to PRRSV vaccine in Pietrain pig Plos One Author List: Islam MA, Große-Brinkhaus C, Pröll M, Uddin MJ, Rony SA, Tesfaye D, Tholen E, Looft C, Schellander K, Neuhoff C Vol. 12, pp . 2017. |
| 2016 |
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13.
Tissue-specific transcriptional profile of cytokine and chemokine genes associated with flavivirus control and non-lethal neuropathogenesis in rabbits Virology Author List: Suen WW, Uddin MJ, Prow NA, Bowen RA, Hall RA, Bielefeldt-Ohmann H Vol. 494, pp 16-Jan. 2016. |
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14.
Kinetics of the West Nile virus induced transcripts of selected cytokines and Toll-like receptors in equine peripheral blood leukocytes Veterinary Research Author List: Uddin MJ, Suen WW, Hall RA, Bielefeldt-Ohmann H Vol. 47, pp 61. 2016. |
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15.
Deciphering transcriptome profiles of porcine PBMC functional in response to porcine reproductive and respiratory syndrome virus vaccine BMC Genomics Author List: Islam MA, Rony SA, Islam MA, Pröll M, Tesfaye D, Große-Brinkhaus C, Tholen E, Looft C, Schellander K, Uddin MJ, Neuhoff C Vol. , pp . 2016. |
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16.
Lipopolysaccharide-induced expression of CD14 in TRIF pathway is epigenetically regulated by sulforaphane in porcine pulmonary alveolar macrophages Innate Immunity Author List: Yang Q, Pröll M, Salilew-Wondim D, Zhang R, Tesfaye D, Fan H, Cinar MU, Große-Brinkhaus C, Tholen E, Looft C, Islam MA, Hölker M, Schellander K, Uddin MJ, Neuhoff C Vol. 22, pp 682-695. 2016. |
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17.
Innate immune response signature of non-lethal West Nile virus infection in horses and in a novel rabbit model Microbial Pathogenesis Author List: Bielefeldt-Ohmann H, Bosco-Lauth A, Uddin MJ, Suen WW, Hartwig A, Barcelon J, Wang W, Prow NA, Hall RA, and Bowen RA Vol. , pp 71-79. 2016. |
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18.
Tissue-specific transcriptional profile of cytokine and chemokine genes associated with West Nile virus control in a novel rabbit model Author List: Suen WW, Uddin MJ, Prow NA, Bowen RA, Hall RA, Bielefeldt-Ohmann H Vol. , pp . 2016. |
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19.
Lipopolysaccharide-induced gene expression of CD14 in TRIF pathway is epigenetically regulated by sulforaphane in porcine pulmonary alveolar macrophages Journal of Animal Science Author List: Yang Q, Pröll MJ, Wondim DS, Zhang R, Tesfaye D, Fan H, Cinar MU, Grosse-Brinkhaus C, et al. Vol. 94, pp 41-42. 2016. |
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20.
Comparative analyses of PBMC transcriptome profiles between German Landrace and Pietrain pigs following PRRSV vaccination Author List: Islam M A, Grosse-Brinkhaus C, Pröll M, Uddin MJ, Rony S A, Tesfaye D, et al. Vol. , pp . 2016. |
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21.
West Nile virus regulated transcriptome kinetics of peripheral blood mononuclear cells Author List: Uddin MJ, Suen WW, Bosco-Lauth A, Hartwig A, Hall RA, Bowen RA, Bielefeldt-Ohmann H Vol. , pp . 2016. |
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22.
Peripheral transcriptome kinetics in response to West Nile virus infection Author List: Uddin MJ, Suen WW, Bosco-Lauth A, Hartwig A, Hall RA, Bowen RA, Bielefeldt-Ohmann H Vol. , pp . 2016. |
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23.
Cell-type dependent immune response post porcine reproductive and respiratory syndrome virus infection Journal of Animal Science Author List: Pröll MJ, Neuhoff C, Große-Brinkhaus C, Müller MA, Drosten C, Uddin MJ, et al. Vol. 94, pp 151-151. 2016. |
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24.
Lipopolysaccharide-induced gene expression of CD14 in TRIF pathway is epigenetically regulated by sulforaphane Journal of Animal Science Author List: Yang Q, Pröll MJ, Wondim DS, Zhang R, Tesfaye D, Fan H, Cinar MU, Uddin MJ, et al. Vol. 94, pp 41-42. 2016. |
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25.
Sulforaphane enhances proliferation of porcine satellite cells through suppression of TGF-β signaling pathway Journal of Animal Science Author List: Zhang R, Neuhoff C, Fan H, Welzenbach J, Yang Q, Uddin MJ, Cinar MU, et al. Vol. 94, pp 41-41. 2016. |
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26.
Polymorphisms of NELL1 and RNCK1 in relation to porcine growth, carcass and meat quality traits Journal of Animal Science Author List: Zhang R, Große-Brinkhaus C, Heidt H, Uddin MJ, Cinar MU, Tesfaye D, et al. Vol. 94, pp 55-56. 2016. |
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27.
Transcriptome profiling of the peripheral blood mononuclear cells following PRRSV vaccination in Pietrain pig Journal of Animal Science Author List: Islam A, Neuhoff C, Große-Brinkhaus C, Pröll MJ, Uddin MJ, Rony SA, et al. Vol. 94, pp 153-154. 2016. |
| 2015 |
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28.
Polymorphisms and expression analysis of SOX-6 in relation to porcine growth, carcass, and meat quality traits Meat Science Author List: Zhang R, Große-Brinkhaus C, Heidt H, Uddin MJ, Cinar MU, Tesfaye D, Tholen E, Looft C, Schellander K, Neuhoff C Vol. 107, pp 26-32. 2015. |
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29.
Preliminary study of FMOs, CYP21, ESR1, PLIN2 and SULT2A1 as candidate gene for compounds related to boar taint Meat Science Author List: Neuhoff C, Gunawan A, Farooq MO, Cinar MU, Große-Brinkhaus C, Sahadevan S, Frieden L, Tesfaye D, Tholen E, Looft C, Schellander K, Uddin MJ Vol. 108, pp 67-73. 2015. |
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30.
Sulforaphane epigenetically regulates innate immune responses of porcine monocyte-derived dendritic cells induced with Lipopolysaccharide PLoS One Author List: Qu X, Pröll M, Neuhoff C, Zhang R, Cinar MU, Tesfaye D, Große-Brinkhaus C, Tholen E, Looft C, Schellander K, Uddin MJ Vol. 10, pp . 2015. |
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31.
Experimental West Nile virus infection in rabbits: an alternative model for studying mechanism of non-lethal meningoencephalitis and virus control Pathogens Author List: Suen WW, Uddin MJ, Wang W, Brown V, Adney D, Broad N, Prow NA, Hall RA, Bowen RA, Bielefeldt-Ohmann H Vol. 4, pp 529-558. 2015. |
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32.
West Nile virus alters the cytokines and TLRs transcriptome profiled in rabbit peripheral leukocytes Frontiers in Veterinary Sciences Author List: Uddin MJ, Suen WW, Prow NA, Hall RA, Bielefeldt-Ohmann H Vol. 2, pp 76. 2015. |
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33.
RNA-Seq analysis of porcine reproductive and respiratory syndrome virus infected respiratory cells Author List: Pröll M, Neuhoff C, Grosse-Brinkhaus C, Müller M A, Drosten C, Uddin MJ, Tesfaye D, Tholen E, Schellander K Vol. , pp . 2015. |
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34.
A novel rabbit model for investigating West Nile virus pathogenesis and immune response Author List: Suen WW, Prow NA, Uddin MJ, Wang W, Brown V, Adney D, Broad N, Bowen RA, Hall RA, Bielefeldt-Ohmann H Vol. , pp . 2015. |
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35.
Transcriptional kinetics of West Nile virus induced cytokines and Toll-like receptors in equine peripheral blood leukocytes Author List: Uddin MJ, Suen WW, Bosco-Lauth A, Hartwig A, Hall RA, Bowen RA, Bielefeldt-Ohmann H Vol. , pp . 2015. |
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36.
Innate immune response signature of non-lethal West Nile Virus infection in horses and in a novel rabbit model Author List: Bielefeldt-Ohmann H, Uddin MJ, Suen WW, Bosco-Lauth A, Prow NA, Hall RA, Bowen RA Vol. , pp . 2015. |
| 2014 |
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37.
Massive deregulation of miRNAs from nuclear reprogramming errors during trophoblast differentiation for placentogenesis in cloned pregnancy BMC Genomics Author List: Hossain MM, Tesfaye D, Salilew-Wondim D, Held E, Proell M, Rings F, Kirfel G, Looft C, Tholen E, Uddin MJ, Schellander K, Hoelker M Vol. 15, pp 43. 2014. |
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38.
Comparison of the innate immune responses of porcine monocyte-derived dendritic cells and splenic dendritic cells stimulated with lipopolysaccharide Innate Immunity Author List: Qu X, Cinar MU, Fan H, Pröll M, Tesfaye D, Tholen E, Looft C, Hölker M, Schellander K, Uddin MJ Vol. 21, pp 242-54. 2014. |
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39.
Regulatory microRNA enrichment and degradation in granulosa cells during bovine follicular recruitment and dominance Author List: Salilew-Wondim D, Ahmad I, Gebremedhn S, Sahadevan S, Hoelker M, Rings F, Uddin MJ, Tholen E, Looft C, Schellander K, Tesfaye D Vol. , pp . 2014. |
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40.
Expression profiling of noncoding microRNAs in bovine granulosa cells of preovulatory dominant follicle using deep sequencing Author List: Gebremedhn S, Ahmad I, Salilew-Wondim D, Sahadevan S, Hoelker M, Rings F, Uddin MJ, Tholen E, Looft C, Schellander K, Tesfaye D Vol. , pp . 2014. |
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41.
Relative abundance of extra-cellular miRNAs in bovine follicular fluid: Implication for cell–cell communication during oocyte growth Animal Reproduction Science Author List: Sohel MMH, Seifi Noferesti S, Salilew-Wondim D, Hoelker M, Rings F, Tholen E, Uddin MJ, Looft C, Schellander K, Tesfaye D Vol. 149, pp 98-101. 2014. |
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42.
Polymorphisms and expression analysis of SOX-6 in relation to porcine growth, carcass and meat quality traits Author List: Zhang R, Neuhoff C, Uddin MJ, Cinar MU, Große-Brinkhaus C, Tesfaye D, Tholen E, Looft C, Schellander K Vol. , pp . 2014. |
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43.
Sulforaphane inhibits CD14 gene expression in LPS stimulated alveolar macrophages of German Landrace pigs Author List: Yang Q, Neuhoff C, Zhang R, Pröll M, Große-Brinkhaus C, Uddin MJ, Cinar MU, Fan H, Tesfaye D, Islam M A, Qu X, Tholen E, Hoelker M, Islam MA, Schellander K Vol. , pp . 2014. |
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44.
Sulforaphane epigenetically regulates innate immune responses of porcine monocyte-derived dendritic cells induced with lipopolysaccharide Author List: Qu X, Pröll M, Neuhoff C, Zhang R, Cinar MU, Tesfaye D, Große-Brinkhaus C, Tholen E, Looft C, Hoelker M, Schellander K, Uddin MJ Vol. , pp . 2014. |
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45.
RNA-Seq analysis of respiratory cells infected with porcine reproductive and respiratory syndrome virus (PRRSV) Author List: Pröll M, Neuhoff C, Große-Brinkhaus C, Sahadevan S, Qu X, Cinar MU, Müller MA, Drosten C, Uddin MJ, Tesfaye D, Tholen E, Looft C, Schellander K Vol. , pp . 2014. |
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46.
West Nile Virus (WNV) infection alters the cytokines and TLRs transcriptome profiles in rabbit PBL Author List: Uddin MJ, Suen W, Prow NA, Hall RA, Bielefeldt-Ohmann H Vol. , pp . 2014. |
| 2013 |
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47.
Prevalence and diagnostic test comparison of brucellosis in cattle of Pabna and Mymensingh districts of Bangladesh Pakistan Journal of Scientific and Industrial Research Author List: Rahman MS, Rahman MN, Islam M, Chakrabartty A, Sarker RR, Akther L, Uddin MJ Vol. 56, pp 147-153. 2013. |
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48.
Seroprevalence of brucellosis in sheep of Gaibandha district in Bangladesh Progressive Agriculture Author List: Rahaman MN, Rahman MS, Islam MT, Sarabontuhura M, Chakrabartty A, Sarker RR, Uddin MJ Vol. 23, pp 25-32. 2013. |
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49.
Evaluation of suitable reference genes for gene expression studies in porcine PBMCs in response to LPS and LTA BMC Research Notes Author List: Cinar MU, Islam MA, Uddin MJ, Tholen E, Tesfaye D, Looft C, Schellander K Vol. 6, pp 56. 2013. |
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50.
Expression patterns of porcine Toll-like Receptors family set of genes (TLR1-10) in gut-associated lymphoid tissues alter with age Research in Veterinary Science Author List: Uddin MJ, Kaewmala K, Tesfaye D, Tholen E, Looft C, Schellander K, Cinar MU Vol. 95, pp 92-102. 2013. |
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51.
Association and expression analysis of porcine HNF1A gene in regards to the meat quality Meat Science Author List: Kayan A, Uddin MJ, Phatsara C, Wimmers K, Ponsuksili S, Tesfaye D, Looft C, Juengst H, Tholen E, Schellander K, Cinar MU Vol. 94, pp 474-479. 2013. |
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52.
A genetical genomics approach reveals new candidates and confirms known candidate genes for drip loss in a porcine resource population Mammalian Genome Author List: Heidt H, Cinar MU, Uddin MJ, Looft C, Jüngst H, Tesfaye D, Becker A, Zimmer A, Ponsuksili S, Wimmers K, Tholen E, Schellander K, Große-Brinkhaus C Vol. 24, pp 416-426. 2013. |
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53.
Exosomal and non-exosomal transport of extra-cellular microRNAS in follicular fluid: implications for bovine oocyte developmental competence PLoS One Author List: Sohel MMH, Hoelker M, Noferesti SS, Salilew-Wondim D, Tholen E, Looft C, Rings F, Uddin MJ, Spencer TE, Schellander K, Tesfaye D Vol. 8, pp . 2013. |
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54.
Age-associated differential production of IFN-γ, IL-10 and GM-CSF by porcine alveolar macrophages in response to lipopolysaccharide Veterinary Journal Author List: Islam MA, Uddin MJ, Tholen E, Tesfaye D, Looft C, Schellander K, Cinar MU Vol. 198, pp 245-251. 2013. |
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55.
RNA deep sequencing reveals novel candidate genes and polymorphisms in boar testis and liver tissues with divergent androstenone levels PLoS One Author List: Gunawan A, Sahadevan S, Neuhoff C, Große-Brinkhaus C, Gad A, Frieden L, Tesfaye D, Tholen E, Looft C, Uddin MJ, Schellander K, Cinar MU Vol. 8, pp . 2013. |
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56.
Identification of the novel candidate genes and variants in boar liver tissues with divergent skatole levels using RNA Deep sequencing PLoS One Author List: Gunawan A, Sahadevan S, Cinar MU, Neuhoff C, Große-Brinkhaus C, Frieden L, Tesfaye D, Tholen E, Looft C, Wondim DS, Hölker M, Schellander K, Uddin MJ Vol. 8, pp . 2013. |
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57.
Pathway based analysis of genes and interactions influencing porcine testis samples from boars with divergent androstenone content in back fat PLoS One Author List: Sahadevan S, Gunawan A, Tholen E, Große-Brinkhaus C, Tesfaye D, Schellander K, Hofmann-Apitius M, Cinar MU, Uddin MJ Vol. 9, pp . 2013. |
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58.
Activity of NRF2-mediated oxidative stress response in bovine embryos Author List: Tesfaye D, Amin A, Held E, Gad A, Salilew-Wondim D, Prastowo S, Hoelker M, Rings F, Tholen E, Uddin MJ, Looft C, Schellander K Vol. , pp . 2013. |
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59.
Relative abundance of extra-cellular miRNAs in bovine folicular fluid: Implication for cell-cell communication during oocyte growth Author List: Sohel MMH, Seifi Noferesti S, Salilew-Wondim D, Hoelker M, Rings F, Tholen E, Uddin MJ, Looft C, Schellander K, Tesfaye D Vol. , pp . 2013. |
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60.
Activity of NRF2 mediated oxidative stress response and embryo survival under oxidative stress condition Author List: Amin A, Held E, Gad A, Salilew-Wondim D, Prastowo S, Hoelker M, Rings F, Tholen E, Uddin MJ, Looft C, Schellander K, Tesfaye D Vol. , pp . 2013. |
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61.
Epigenetic regulation of Smad7 in porcine satellite cell Author List: Zhang R, Cinar MU, Fan H, Tesfaye D, Tholen E, Looft C, Schellander K, Uddin MJ Vol. , pp . 2013. |
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62.
Comparison of the porcine monocytederived dendritic cells and spleenic dendritic cells immune responses to lipopolysaccharide stimulation Author List: Qu X, Cinar MU, Fan H, Pröll M, Tesfaye D, Tholen E, Looft C, Hoelker M, Schellander K, Uddin MJ Vol. , pp . 2013. |
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63.
RNA-Seq Analyse von porcinen dendritischen Zellen nach experimenteller Infektion mit PRRSV Author List: Pröll M, Große-Brinkhaus C, Sahadevan S, Qu X, Islam MA, Müller MA, Drosten C, Cinar MU, Uddin MJ, Tesfaye D, Tholen E, Looft C, Schellander K Vol. , pp . 2013. |
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64.
Expression of AMPK and lipid metabolism related genes in bovine embryo cultured with and without serum Author List: Prastowo S, Amin A, Rings F, Salilew-Wondim D, Uddin MJ, Tholen E, Looft C, Schellander K, Tesfaye D, Hoelker M Vol. , pp . 2013. |
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65.
Kinetics cytokine mRNA and protein secretion by porcine alveolar macrophages in response to lipopolysaccharide Author List: Islam MA, Uddin MJ, Tholen E, Tesfaye D, Looft C, Schellander K, Cinar MU Vol. , pp . 2013. |
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66.
In vivo inflammation of porcine lung induced by gram-negative and gram-positive bacterial components Author List: Islam MA, Uddin MJ, Tholen E, Tesfaye D, Looft C, Cinar MU, Schellander K Vol. , pp . 2013. |
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67.
Investigation of miRNAs enrichment and degradation in bovine granulosa cells during follicular development using next generation sequencing Author List: Ijas A, Salilew-Wondim D, Sahadevan S, Etay SG Hoelker M, Rings F, Uddin MJ, Tholen E, Looft C, Tesfaye D, Schellander K Vol. , pp . 2013. |
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68.
Populationsübergreifende GWAS für ein Fruchtbarkeitsmerkmal in Mutterlinien beim Schwein Author List: Bergfelder S, Große-Brinkhaus C, Looft C, Uddin MJ, Schellander K, Tholen E Vol. , pp . 2013. |
| 2012 |
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69.
Survey of feline influenza and feline leukemia virus infection in local breed cats of Bangladesh International Journal of Tropical Medicine Author List: Islam MA, Rahman MS, Rony SA, Uddin MJ, Rahman AKMA, Islam MT, Islam MA Vol. 7, pp 98-102. 2012. |
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70.
Evaluation of Avian Influenza and Newcastle Disease Virus Detection kit using field samples from domestic and semi-domestic birds Journal of Veterinary Clinics Author List: Rahman MS, Malek MA, Islam MA, Uddin MJ, Ahasan MS, Chakrabartty A, Sakib MN, Chae JS Vol. 29, pp 309-314. 2012. |
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71.
Prevalence of Avian Influenza and Newcastle Disease Viruses in poultry in selected areas of Bangladesh Archives of Clinical Microbiology Author List: Rahman MS, Rabbani MG, Uddin MJ, Her M Vol. 14, pp 1909-1912. 2012. |
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72.
Prevalence of brucellosis in Black Bengal goats in Bangladesh Bangladesh Journal of Veterinary Medicine Author List: Rahman MS et al. Mithu S, Islam MT, Uddin MJ, Sarker RR, Sarker MAS, Akhter L Vol. 10, pp 51-56. 2012. |
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73.
Prevalence of brucellosis in pigs, the first report from Bangladesh Bangladesh Journal of Veterinary Medicine Author List: Rahman MS, Nuruzzaman M, Ahasan MS, Sarker RR, Chakrabartty A, Nahar A, Uddin MJ, Sarker MAS, Akhter L Vol. 10, pp 75-80. 2012. |
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74.
Seroprevalence of brucellosis in cattle in selected area of Bangladesh and comparison between Rose Bengal test and i-ELISA Korean Journal of Veterinary Service Author List: Rahman MS, Chakrabartty A, Islam MT, Sarker RR, Alam ME, Uddin MJ, Akther L, Song HJ Vol. 35, pp 133-137. 2012. |
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75.
Brucellosis among ruminants in some districts of Bangladesh using four conventional serological assays African Journal of Microbiology Research Author List: Rahman MS, Her M, Kim JY, Kang SI, Lee K, Uddin MJ, Chakrabartty A, Jung SC Vol. 6, pp 4775-4781. 2012. |
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76.
Association and expression study of MMP3, TGFb1 and COL10A1 as candidate genes for leg weakness related traits in pigs Molecular Biology Report Author List: Laenoi W, Rangkasenee N, Uddin MJ, Cinar MU, Phatsara C, Tesfaye D, Scholz AM, Tholen E, Looft C, Sauerwein H, Wimmers K, Schellander K Vol. 39, pp 3893-901. 2012. |
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77.
Investigation in association and expression of ESR2 as a candidate gene for boar fertility and sperm quality Reproduction in Domestic Animals Author List: Gunawan A, Cinar MU, Uddin MJ, Kaewmala K, Tesfaye D, Phatsara C, Tholen E, Looft C, Schellander K Vol. 47, pp 782-90. 2012. |
|
78.
Association and expression quantitative trait loci (eQTL) analysis of porcine AMBP, GC and PPP1R3B genes with meat quality traits Molecular Biology Report Author List: Cinar MU, Kayan A, Uddin MJ, Jonas E, Tesfaye D, Phatsara C, Ponsuksili S, Wimmers K, Tholen E, Looft C, Jüngst H, Schellander K Vol. 39, pp 4809-21. 2012. |
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79.
Evaluation of suitable reference genes for gene expression studies in porcine alveolar macrophages in response to LPS and LTA BMC Research Notes Author List: Cinar MU, Islam MA, Uddin MJ, Tholen E, Tesfaye D, Looft C, Schellander K Vol. 5, pp 107. 2012. |
|
80.
Investigation on association and expression of PLCz and COX-2 as candidate genes for boar sperm quality and fertility Reproduction in Domestic Animals Author List: Kaewmala K, Uddin MJ, Cinar MU, Große-Brinkhaus C, Jonas E, Tesfaye D, Phatsara C, Tholen E, Looft C, Schellander K Vol. 47, pp 213-23. 2012. |
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81.
Age-related changes in phagocytic activity and production of pro-inflammatory cytokines by lipopolysaccharide stimulated porcine alveolar macrophages Cytokines Author List: Islam MA, Uddin MJ, Tholen E, Tesfaye D, Looft C, Schellander K, Cinar MU Vol. 60, pp 707-717. 2012. |
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82.
Expression of Toll-like receptors and downstream genes in lipopolysaccharide-induced porcine alveolar macrophages Veterinary Immunology and Immunopathology Author List: Islam MA, Cinar MU, Uddin MJ, Tholen E, Tesfaye D, Looft C, Schellander K Vol. 146, pp 62-73. 2012. |
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83.
Expression dynamics of Toll-like receptors mRNA and cytokines in porcine peripheral blood mononuclear cells stimulated by bacterial lipopolysaccharide Veterinary Immunology and Immunopathology Author List: Uddin MJ, Nuro-Gyina PK, Cinar MU, Kaewmala K, Tesfaye D, Tholen E, Juengst H, Looft C, Schellander K Vol. 30, pp 211-22. 2012. |
|
84.
Charakterisierung von QTL-Stand der QTL analyse beim schwein Nova Acta Leopoldina Author List: Grosse-Brinkhaus C, Cinar MU, Uddin MJ, Schellander K Vol. NF 133, pp 131-142. 2012. |
|
85.
Genetic testing for dentatorubral-pallidoluysian atrophy (DRPLA) in Parkinsonism Author List: Rahman MS, Nagai Y, Popiel HA, Fujikake N, Ahmed MU, Islam MA, Islam MT, Ahmed S, Rahman KM, Uddin MJ, Toda T Vol. , pp . 2012. |
|
86.
Detection of avian influenza viral antigen in ducks using rapid test kits Author List: Sarker RR, Rahman MS, Khan MAHNA, Uddin MJ Vol. , pp . 2012. |
| 2011 |
|
87.
Detection of Avian Influenza viral antigen in ducks of haor areas of Netrakona district using rapid test kits Bangladesh Journal of Veterinary Medicine Author List: Sarker RR, Rahman MS, Uddin MJ, Khan MAHNA Vol. 9, pp 133 – 136. 2011. |
|
88.
Association study and expression analysis of CD9 as candidate gene for boar sperm quality and fertility traits Animal Reproduction Science Author List: Kaewmala K, Uddin MJ, Cinar MU, Große-Brinkhaus C, Jonas E, Tesfaye D, Phatsara C, Tholen E, Looft C, Schellander K Vol. 125, pp 170-179. 2011. |
|
89.
Polymorphism and expression of the porcine Tenascin C gene associated with meat and carcass quality Meat Science Author List: Kayan A, Cinar MU, Uddin MJ, Phatsara C, Wimmers K, Ponsuksili S, Tesfaye D, Looft C, Juengst H, Tholen E, Schellander K Vol. 89, pp 76-83. 2011. |
|
90.
Investigation on interferon alpha-inducible protein 6 (IFI6) gene as a candidate for meat and carcass quality in pig Meat Science Author List: Kayan A, Uddin MJ, Cinar MU, Große-Brinkhaus C, Phatsara C, Wimmers K, Ponsuksili S, Tesfaye D, Looft C, Juengst H, Tholen E, Schellander K Vol. 88, pp 755-760. 2011. |
|
91.
Quantitative trait loci analysis for leg weakness-related traits in a Duroc x Pietrain crossbred population Genetics Selection Evolution Author List: Laenoi W, Uddin MJ, Cinar MU, Große-Brinkhaus C, Tesfaye D, Jonas E, Scholz AM, Tholen E, Looft C, Wimmers K, Phatsara C, Juengst H, Sauerwein H, Mielenz M, Schellander K Vol. 43, pp 13. 2011. |
|
92.
Association study and expression analysis of porcine ESR1 as a candidate gene for boar fertility and sperm quality Animal Reproduction Science Author List: Gunawan A, Kaewmala K, Uddin MJ, Cinar MU, Tesfaye D, Phatsara C, Tholen E, Looft C, Schellander K Vol. 128, pp 21-Nov. 2011. |
|
93.
Non genetic factors effect on reproductive performance and preweaning mortality from artificially and naturally bred in Bali cattle Journal of the Indonesian Tropical Animal Agriculture Author List: Gunawan A, Sari R, Parwoto Y, Uddin MJ Vol. 36, pp 83-90. 2011. |
|
94.
Mapping quantitative trait loci for innate immune response in the pig International Journal of Immunogenetics Author List: Uddin MJ, Cinar MU, Grosse-Brinkhaus C, Tesfaye D, Tholen E, Juengst H, Looft C, Wimmers K, Phatsara C, Schellander K Vol. 38, pp 121–131. 2011. |
|
95.
Age-related changes in relative expression stability of commonly used housekeeping genes in selected porcine tissues BMC Research Notes Author List: Uddin MJ, Cinar MU, Tesfaye D, Tholen E, Looft C, Schellander K Vol. 4, pp 441. 2011. |
|
96.
Mapping of quantitative trait loci for immune response traits and expression patterns of Toll-like receptors in pigs Author List: Uddin MJ Vol. , pp . 2011. |
|
97.
Genetic testing for spinocerebellar ataxia (SCA) in Parkinsonism Proceedings of the Vet2011 Celebration Author List: Rahman MS, Nagai Y, Popiel HA, Fujikake N, Okamoto Y, Ahmed MU, Islam MA, Ahasan MS, Ahmed S, Rahman KM, Uddin MJ, Ahmed Q, Hossain MA, Toda T Vol. , pp p. 39. 2011. |
|
98.
Gene expression of Toll-like receptors and associated molecules in LPS-induced swine alveolar macrophage Author List: Islam MA, Cinar MU, Uddin MJ, Tholen E, Tesfaye D, Looft C, Schellander K Vol. , pp . 2011. |
|
99.
Detection of quantitative trait loci affecting serum cholesterol, LDL, HDL, and triglyceride in pigs Author List: Cinar MU, Uddin MJ, Duy DN, Tesfaye D, Tholen E, Looft C, Schellander K Vol. , pp . 2011. |
|
100.
Expression analysis of porcine aromatase (CYP19) as a specific target gene in testis Author List: Gunawan A, Kaewmala K, Uddin MJ, Cinar MU, Tesfaye D, Tholen E, Looft C, Schellander K Vol. , pp . 2011. |
|
101.
Expression study of TLR1-10 genes in selected tissues of newborn, young and adult pigs by GeXP Author List: Uddin MJ, Kayan A, Cinar MU, Tesfaye D, Looft C, Jüngst H, Tholen E, Schellander K Vol. , pp . 2011. |
| 2010 |
|
102.
Genetic Testing for Huntington's Disease in Parkinsonism Mymensingh Medical Journal Author List: Rahman MS, Nagai Y, Popiel HA, Fujikake N, Okamoto Y, Ahmed MU, Islam MA, Islam MT, Ahmed S, Rahman KM, Uddin MJ, Dey SK, Ahmed Q, Hossain MA, Jahan N, Toda T Vol. 19, pp 510-514. 2010. |
|
103.
Antigenic detection of feline panleukopenia virus in local breed cats at Tangail district in Bangladesh International Journal of Bioresearch Author List: Islam MA, Rahman MS, Rony SA, Uddin MJ, Rahman AKMA Vol. 2, pp 25-28. 2010. |
|
104.
Molecular characterization and methylation study of matrix gla protein in articular cartilage from pig with osteochondrosis Gene Author List: Laenoi W, Uddin MJ, Cinar MU, Phatsara C, Tesfaye D, Scholz AM, Tholen E, Sauerwein H, Schellander K Vol. 459, pp 24-31. 2010. |
|
105.
Mapping of quantitative trait loci for mycoplasma and tetanus antibodies and interferon-gamma in a porcine F2 Duroc x Pietrain resource population Mammalian Genome Author List: Uddin MJ, Grosse-Brinkhaus C, Cinar MU, Jonas E, Tesfaye D, Tholen E, Juengst H, Looft C, Ponsuksili S, Wimmers K, Phatsara C, Schellander K Vol. 21, pp 409-418. 2010. |
|
106.
Effect of interferon alpha-inducible protein 6 (IFI6) gene on drip loss in pig DGfZ Annual Conference Author List: Kayan A, Uddin MJ, Cinar MU, Wimmers K, Ponsuksili S, Tesfaye D, Looft C, Jüngst H, Tholen E, Phatsara C, Schellander K Vol. , pp . 2010. |
|
107.
QTL mapping for leg weakness related traits in a Duroc x Pietrain F2 resource population 9th World Congress on Genetics Applied to Livestock Production Author List: Laenoi W, Uddin MJ, Cinar MU, Große-Brinkhaus C, Tesfaye D, Jonas E, Scholz AM, Tholen E, Looft C, Wimmers K, Phatsara C, Sauerwein H, Schellander K Vol. , pp 86 (Abstr). 2010. |
|
108.
Mapping quantitative trait loci associated with leg weakness related traits in pigs Symposium ÖAW Author List: Laenoi W, Uddin MJ, Cinar M, Große-Brinkhaus C, Tesfaye D, Jonas E, Scholz A, Tholen E, Looft C, Wimmers K, Phatsara C, Jüngst H, Sauerwein H, Schellander K Vol. , pp 331 (Abstr). 2010. |
|
109.
Mapping QTL for cytokines and toll-like receptors in a Duroc x Pietrain resource population Symposium ÖAW Author List: Uddin MJ, Cinar MU, Große-Brinkhaus C, Tesfaye D, Tholen E, Phatsara C, Wimmers K, Looft C, Schellander K Vol. , pp 339 (Abstr). 2010. |
|
110.
Molecular analysis of matrix GLA protein (MGP) as a candidate for osteochondrosis in pigs International Symposium on Animal Genomics for Animal Health Author List: Laenoi W, Uddin MJ, Cinar M, Phatsara C, Tesfaye D, Tholen E, Sauerwein H, Schellander K Vol. , pp pp. 70 (Abstr). 2010. |
|
111.
QTL mapping for innate immune traits in a Duroc x Pietrain resource population International Symposium on Animal Genomics for Animal Health Author List: Uddin MJ, Cinar MU, Tesfaye D, Tholen E, Phatsara C, Looft C, Schellander K Vol. , pp 39 (Abstr). 2010. |
|
112.
Mapping QTL for innate immune response in a Duroc x Pietrain resource population 21st International Pig Veterinary Society Congress Author List: Uddin MJ, Tesfaye D, Tholen E, Phatsara C, Looft C, Schellander K Vol. , pp 914 (Abstr). 2010. |
|
113.
Detection of QTL influencing antibody and interferon production in pigs 18th Plant & Animal Genomes Conference Author List: Uddin MJ, Große-Brinkhaus C, Tesfaye D, Hölker M, Jüngst H, Tholen E, Phatsara C, Schellander K, Looft C Vol. , pp P597 (Abstract 18). 2010. |
| 2009 |
|
114.
Epidemiology and genetic testing of polyglutamine diseases in Bangladesh Proceedings of the 5th Annual Scientific Conference of BSVER Author List: Rahman MS, Nagai Y, Popiel HA, Fujikake N, Okamoto Y, Ahmed MU, Islam MA, Ahasan MS, Ahmed S, Rahman KM, Uddin MJ, Ahmed Q, Hossain MA, Toda T Vol. , pp p. 48. 2009. |
|
115.
Detection of QTL influencing antibodies and interferon production in pig DGfZ/GfT Annual Conference Author List: Uddin MJ, Große-Brinkhaus C, Tesfaye D, Hölker M, Jüngst H, Tholen E, Looft C, Schellander K, Phatsara C Vol. , pp 78-79. 2009. |
| 2008 |
|
116.
Tube agglutination test is superior than other serological tests for diagnosis of brucellosis in small ruminants Korean Journal of Veterinary Service Author List: Rahman MS, Jahan N, Hossain MA, Uddin MJ, Niraj KS, Islam KBMS, Ahasan MS, Rahman AKMA, Song HJ Vol. 31, pp 493-496. 2008. |
|
117.
Prevalence of Brucellosis and its association with reproductive problems in goats in Bangladesh Korean Journal of Veterinary Service Author List: Rahman MS, Uddin MJ, Song HJ Vol. 31, pp 433-438. 2008. |
| 2007 |
|
118.
Relation between brucellosis and husbandry practices in goats in Bangladesh Korean Journal of Veterinary Service Author List: Uddin MJ, Rahman MS, Hossain MA, Akter SH, Majumder S, Park JH, Song HJ Vol. 30, pp 261-269. 2007. |
|
119.
Seroprevalence of small ruminants brucellosis in selected area of Bangladesh Korean Journal of Veterinary Service Author List: Uddin MJ, Rahman MS, Park JH, Chae JS, Islam MT, Islam MA, Hossain MA Vol. 31, pp 511-525. 2007. |
|
120.
Brucellosis of goat in Bangladesh Journal of the Bangladesh Agricultural University Author List: Uddin MJ, Rahman MS, Akter SH Vol. 5, pp 275-282. 2007. |
|
121.
Effects of selenium and vitamin E on the lymphocytes and immunoglobulin (Ig)-containing plasma cells in broiler chickens Proceedings for poster presentation Author List: Akter SH, Khan MZI, Uddin MJ Vol. , pp . 2007. |
|
122.
Morphological study of the major lymphoid tissues and ileum of broiler chickens fed diets supplemented with selenium and vitamin E Proceedings for oral presentation Author List: Akter SH, Khan MZI, Uddin MJ Vol. , pp . 2007. |
| 2006 |
|
123.
Survey of brucellosis in sheep and goats in Bangladesh Author List: Uddin MJ Vol. , pp . 2006. |
|
124.
A short history of brucellosis: special emphasis on Bangladesh Bangladesh Journal of Veterinary Medicine Author List: Rahman MS, Uddin MJ, Park JH, Chae JS, Rahman MB Vol. 4, pp p. 01-06. 2006. |
| 2005 |
|
125.
Prevalence of Anaplasma phagocytophilum and Ehrlichia chaffeensis infection in ticks collected from cattle in Bangladesh Proceedings of the 5th International Conference on Ticks and Tick-borne Pathogens Author List: Rahman MS, Uddin MJ, Kim CM, Deshai AR, Shringi S, Shah DH, Lee MJ, Li YH, Cho MR, Park JH, Lee JH, Eo SK, Chae JS Vol. , pp p. 136. 2005. |
| 1970 |
|
126.
Sulforaphane epigenetically regulates the LPS-induced kinetics of innate immune response in porcine monocyte-derived dendritic cells Cellular and Molecular Immunology Author List: Qu X, Neuhoff C, Cinar MU, Pröll M, Fan H, Salilew-Wondim D, Große-Brinkhaus C, Tholen E, Looft C, Tesfaye D, Hölker M, Schellander K, Uddin MJ Vol. , pp . 1970. |
|
127.
Epistatic QTL pairs associated with immune traits in a porcine Duroc-Pietrain population International Journal of Immunogenetics Author List: Uddin MJ, Grosse-Brinkhaus C, Tesfaye D, Tholen E, Looft C, Schellander K, Cinar MU Vol. , pp . 1970. |
|
128.
Identification of genes and pathways involved in the metabolism of androstenone and skatole in liver of young boars using transcriptome analysis Meat Science Author List: Neuhoff C, Große-Brinkhaus C, Cinar MU, Frieden L, Pröll M, Tesfaye D, Tholen E, Looft C, Zimmer A, Becker A, Uddin MJ, Schellander K Vol. , pp . 1970. |
|
129.
Expression of selected transcripts in the experimentally WNV-infected horse Author List: Uddin MJ, Suen WW, V Brown, D Adney, N Broad, RA Hall, RA Bowen, H Bielefeldt-Ohmann Vol. , pp . 1970. |
|
130.
Study of CDKN1A and KRT8 as candidate genes for compounds related to boar taint Meat Science Author List: Gunawan A, Prastowo S, Zhang R, Sahadevan S, Cinar MU, Neuhoff C, Frieden L, Grosse-Brinkhaus C, Tesfaye D, Tholen E, Hölker M, Looft C, Schellander K, Uddin MJ Vol. , pp . 1970. |
|
131.
Gene Expression Profile of Longisimus Muscle Tissues in Javanese Fat Tailed Sheep with Extreme Value of Fatty Acid Compositions Livestock Sciences Author List: Gunawan A, Jakaria, Listyarini K, Yamin M, Sumantri C, Inounu I, Akter SH, and Uddin MJ Vol. , pp . 1970. |
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| Total Number: 8 | ||||||||||||||||||||||||||||||||||||||||||||||
|
Involvement in Research Projects and Research Collaborations: Only successful grants are listed below:
|
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Total Number: 25
| SL | Title | Duration | Organizing Institute | Details |
|---|---|---|---|---|
| 1 | Sequencing data analysis using Galaxy platform | 12, 19 and 26 June 2020 | Galaxy Australia | Training on sequencing data analysis using the Galaxy platform. |
| 2 | Library Preparation using Nextera DNA Flex Library Prep Kit and Sequencing of unknown infectious agents using NextSeq 500 | 27-29 November 2019 | BSL, Coopers Plains | Training on library preparation and sequencing using NextSeq 500 (Illumina NGS platform). Analysis of sequence data using Geneious. |
| 3 | Recent Advances in Emerging Animal Diseases (EAD): Preparedness and strategies | 16 to 18 October 2018 | ACDP (Australian Centre for Disease Preparedness) | Workshop on recent advances in emerging animal diseases and strategies for preparedness. |
| 4 | Strategies for Advising International Candidates | 01 August 2016 | UQ-Staff Development | Workshop on strategies for advising international candidates. |
| 5 | Tutor Training | 18 July 2016 | UQ-Staff Development | Workshop on training to become a tutor at UQ. |
| 6 | Research Advisor Masterclass | 14 July 2016 | UQ-Staff Development | Workshop focused on providing guidance for research advisors. |
| 7 | Annual Biosafety Update | 27 July 2016 | UQ-Gatton | Workshop on biosafety updates, essential for research safety. |
| 8 | Adobe Video Connect | 21 January 2015 | UQ-Gatton | Workshop on using Adobe Video Connect for virtual meetings and presentations. |
| 9 | Desktop video recording with Echo360 Personal capture and Online quizzes | 21 January 2015 | UQ-Gatton | Training on desktop video recording with Echo360 for educational purposes. |
| 10 | NHMRC Project and Fellowship Applications | 10 December 2013 | UQ-St Lucia | Seminar on grant writing skills for NHMRC project and fellowship applications. |
| 11 | ARC Project and Fellowship Applications | 05 December 2013 | UQ-St Lucia | Seminar on grant writing skills for ARC project and fellowship applications. |
| 12 | Analysis of Genomic Data using R | 25-28 September 2013 | UQ-Gatton | Training on analyzing genomic data using R programming. |
| 13 | Cytokines, Inflammation and Disease Symposium | 08 September 2013 | UQ-St Lucia | Symposium on cytokines, inflammation, and disease mechanisms. |
| 14 | 1st Introductory Course on Statistical Analysis of Veterinary Research Data | 10-14 March 2012 | Bangladesh Agricultural University | Introductory course on statistical analysis of veterinary research data. |
| 15 | Workshop on ‘Animal Ethics Clearance’ | 1-2 August, 2011 | Theodor Brinkman Graduate School of Agriculture, University of Bonn | Animal ethics clearance workshop |
| 16 | Workshop on Animal Genetics | 10 December 2010 | Wageningen University, Netherlands | Focus on animal genetics |
| 17 | Workshop on ‘Physiology and Biotechnology of Machine Milking and Udder Management | 8-9 October, 2009 | Veterinary-Physiology, Vetsuisse Faculty, University of Bern, Switzerland | Workshop on physiology and biotechnology of machine milking and udder management |
| 18 | Workshop on Pig Genetics | 10 April 2008 | Institute of Pig Genetics (IPG), Beuningen, Netherlands | Oral presentation on innate immune response of pigs |
| 19 | ‘In vivo Electroporation’ | 10-17 August, 2009 | Biochemistry group, Institute of Animal Science, University of Bonn, Germany | Focus on in vivo electroporation |
| 20 | Various courses and lectures | - | Theodor Brinkman Graduate School of Agriculture, University of Bonn | Fulfillment of 30 credits for PhD eligibility |
| 21 | Academic Foundation Training for University Teachers | 9 March to 22 May, 2007 | Graduate Training Institute (GTI), Bangladesh Agricultural University | Training for university teachers |
| 22 | Administration, Office Management and Communication | 15 February to 1 March, 2005 | Graduate Training Institute (GTI), Bangladesh Agricultural University | Training in administration and office management |
| 23 | Scientific Report Writing | 20-27 September, 2005 | Graduate Training Institute (GTI), Bangladesh Agricultural University | Scientific report writing |
| 24 | Basics of MS Office | 17 September to 1 October, 2005 | Graduate Training Institute (GTI), Bangladesh Agricultural University | Training on basics of MS Office |
| 25 | Internship Program | July to December, 2004 | Faculty of Veterinary Science, Bangladesh Agricultural University | Internship program completion |
| ||||
Total Number: 13
| SL | Name | Title | Organizer | Duration | Location |
|---|---|---|---|---|---|
| 1 | 15th Australian Association of Veterinary Laboratory Diagnosticians (AAVLD) meeting | Australian Association of Veterinary Laboratory Diagnosticians | 2019 | Brisbane | |
| 2 | 5th Animal Science Olympics | - | 2018 | Brisbane | |
| 3 | 11th International Veterinary Immunology Symposium (IVIS 2016) | - | 2016 | Gold Coast | |
| 4 | 19th International Congress on Tropical Medicine and Malaria (ICTMM 2016) | - | 2016 | Brisbane | |
| 5 | BIG Retreat Conference | - | 2015 | Gold Coast | |
| 6 | Cytokines Conference | - | 2014 | Melbourne | |
| 7 | Innate Immunity Conference | - | 2011 | Greece | |
| 8 | International Pig Veterinary Society Congress | International Pig Veterinary Society | 2010 | Canada | |
| 9 | Pig Genetics Meeting (France) | - | 2010 | France | |
| 10 | Pig Genetics Meeting (Netherlands) | - | 2008 | Netherlands | |
| 11 | German Society for Animal Science Conference | German Society for Animal Science | 2008-2011 | Germany | |
| 12 | World Veterinary Poultry Association Conference | World Veterinary Poultry Association | 2007 | China | |
| 13 | Bangladesh Society for Veterinary Education and Research Conference | Bangladesh Society for Veterinary Education and Research | 2004-2007, 2012 | Bangladesh |
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